;
// end of json stream
$(document).ready(
function() {
var table = $("#calls").DataTable(
{
order: [[ 6, "desc" ]],
data: data,
columns: [
{data: "id"},
{data: "chrom"},
{data: "pos"},
{data: "genes"},
{data: "ref"},
{data: "alt"},
{data: "worst_consequence"},
{data: "qual"},
% for i in range(len(samples)):
{data: "sample_info.${i}.genotype"},
% endfor
],
columnDefs: [
{
render: function(data, type, row) {
return '' + data + '';
},
targets: 2
},
{
render: function(data, type, row) {
return '+';
},
targets: 0,
orderable: false
},
{
render: function(data, type, row) {
var s = '';
for(var i=0; i' + data[i] + '';
if(i < data.length - 1) {
s += ', ';
}
}
return s;
},
targets: 3
},
]
}
);
}
);
var read_counts_table = null;
function show_details(i) {
if(read_counts_table != null) {
genotype_details_table.destroy();
read_counts_table.destroy();
}
genotype_details_table = $("#genotype-details").DataTable(
{
data: data[i].sample_info,
columns: [
{data: "sample"},
{data: "genotype"},
{data: "depth"},
{data: "ref_depth"},
{data: "alt_depths"},
{data: "strand_bias"}
],
bPaginate: false,
bFilter: false,
bInfo: false
}
);
read_counts_table = $("#read-counts").DataTable(
{
data: data[i].sample_info,
columns: [
{data: "sample"},
% for k, a in enumerate(alleles):
{data: "read_counts.${k}"},
{data: "read_counts.${k + 6}"},
% endfor
],
columnDefs: [
{
render: function(data, type, row) {
if(data == 0) {
return "";
}
return data;
},
targets: [
% for k in range(1, len(alleles) * 2 + 1):
${k},
%endfor
]
}
],
bPaginate: false,
bFilter: false,
bInfo: false
}
);
$("#details").foundation("reveal", "open");
}