Model Configuration#
Note
most of the model is defined within a YAML file (myconfig.yml)
myconfig.yml#
root#
root: /home/phyto/CoccoML/
where to save root files
path_out#
path_out: ModelOutput/
where to save the model output (root + path_out)
traits#
traits: /home/phyto/CoccoML/data/traits.csv
scale_X#
scale_X: True
verbose#
verbose: 1
seed#
seed : 1
n_threads#
n_threads : 2
how many cpu threads to use
cv#
cv : 3
predict_probability#
predict_probability: False
ensemble_config#
regressor: False
classifier: True
m1: “rf”
m2: “xgb”
m3: “knn”