- About pygtftk
- Installing pygtftk/gtftk
- Help on gtftk Unix commands
- Main parser arguments of gtftk
- Command-wide arguments
- Commands from section ‘information’
- Commands from section ‘Editing’
- Commands from section ‘selection’
- Commands from section ‘convertion’
- Commands from section ‘annotation’
- Commands from section ‘coordinates’
- Commands from section ‘sequence’
- Commands from section ‘coverage’
- Commands from section ‘miscellaneous’
- Help on Python package (pygtftk)
- The gtftk.bam.bam_coverage_matrix module
- Writing your own commands