The LinkML Ecosystem
LinkML is part of a growing ecosystem of tools; these may be at varying levels of maturity
Tools that build off LinkML
Data Harmonizer
DataHarmonizer is a ontology-based curation tool that is being adapter to LinkML
Koza
Koza is a data transformation framework for LinkML models
Schemasheets
Schemasheets allows the specification of schemas via excel and google sheets
Bootstrapping Models
linkml-model-enrichment bootstraps schemas from existing structured and semi-structured sources
Templated OWL generation
linkml-owl allows schemas to be used as templates for generating OWL ontologies from LinkML data
Datalog reasoning
linkml-datalog allows rule-based reasoning over linkml data
SPARQL templates
sparqlfun is a framework for generating and executing queries against sparql endpoints
SSSOM-py
sssom-py is a toolkit for managing mappings and is driven by a linkml schema